Why organisms need nitrogen

Nitrogen is essential for making amino acids (the building blocks of proteins) and nucleic acids (DNA and RNA). Although the atmosphere is 78% nitrogen gas (N2), most organisms cannot use nitrogen in this form because the triple bond between the two nitrogen atoms is very strong and difficult to break.

Plants absorb nitrogen in the form of nitrate ions (NO3-) from the soil through their roots by active transport. Animals obtain nitrogen by eating plants or other animals that contain proteins.

Nitrogen fixation

Nitrogen fixation converts atmospheric nitrogen gas (N2) into ammonia (NH3) or ammonium ions (NH4+). This is carried out by nitrogen-fixing bacteria, some of which live freely in the soil and others in root nodules of leguminous plants (such as peas, beans and clover).

The bacteria in root nodules have a mutualistic relationship with the plant: the bacteria fix nitrogen into a usable form for the plant, and the plant provides the bacteria with sugars from photosynthesis. Lightning can also fix small amounts of nitrogen.

Nitrification and denitrification

Nitrification is carried out by nitrifying bacteria in the soil. They convert ammonium ions (NH4+) first into nitrite ions (NO2-) and then into nitrate ions (NO3-), which plants can absorb. Nitrifying bacteria are aerobic and work best in well-aerated, moist soils.

Denitrification is the reverse process, carried out by denitrifying bacteria in anaerobic (waterlogged) conditions. They convert nitrates back into nitrogen gas, which is released into the atmosphere. Denitrification is why waterlogged soils lose fertility.

Decomposition and the role of decomposers

When organisms die or produce waste (urine, faeces), decomposers (bacteria and fungi) break down the proteins and other nitrogen-containing compounds into ammonium ions. This process is called ammonification or putrefaction.

The ammonium ions can then be converted into nitrates by nitrifying bacteria (nitrification), completing the cycle. Farmers add nitrogen to the soil by applying fertilisers (artificial nitrates) or manure (which decomposers convert into ammonium and then nitrates), or by growing leguminous crops that host nitrogen-fixing bacteria.